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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25816481_25826387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25816481 - 25826387

Intron Length:

9907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

TAACTTGCAAAT

Flanking Amino Acid:

LYAFCFSAVKEPWDAQHIPA

Intron Amino Acid Position:

985

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

0.55

71.8

31.4

Major PPT

74.4

0.55

0.9

72.1

32.4

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

40.8

-0.6

56.74

39.3

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705