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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25828170_25833439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25828170 - 25833439

Intron Length:

5270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTGTTCTAATA

Flanking Amino Acid:

FLQSARDHVIVFLYCFPAIS

Intron Amino Acid Position:

917

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

79.3

31.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.79

0.6

84.6

23.3

Minor 5ss

28.1

-2.5

2.7

31.6

42.6

Minor BPS

50.2

1.7

63.76

37.2

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705