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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25833612_25840474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25833612 - 25840474

Intron Length:

6863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

TTTTCCATGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TTTTTTTCCATG

Flanking Amino Acid:

VQPDPASPIHGHNKIITYSR

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

77.3

0.68

81.5

Major PPT

76.7

0.6

70.7

39.8

Minor 5ss

40.2

-1.1

37.2

Minor BPS

48.4

-0.2

62.38

40.7

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705