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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25840508_25840600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25840508 - 25840600

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCAAAT

U12 Branch Point Sequence:

AATCCTGTAAGC

Flanking Amino Acid:

MASCQYSLLKSVQPDPASPI

Intron Amino Acid Position:

849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

53.3

0.08

1.1

Major PPT

83.6

0.76

0.9

80.5

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

46.4

-0.2

2.2

59.13

39.9

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705