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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25840755_25842055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25840755 - 25842055

Intron Length:

1301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTCACA

Flanking Amino Acid:

DRLTLLALLDRTEDIKENVL

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

79.1

37.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.9

0.54

0.9

35.5

Minor 5ss

0.04

2.8

74.4

41.8

Minor BPS

61.4

0.35

80.01

35.9

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705