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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25842199_25845495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25842199 - 25845495

Intron Length:

3297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTACATTGT

5'SS Class:

major

3'SS Sequence:

TTTGTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAGAAT

U12 Branch Point Sequence:

TTGTTTTTAAAG

Flanking Amino Acid:

ARRTLSETPRQPSQDPEDSS

Intron Amino Acid Position:

750

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

63.2

43.9

Major BPS

48.5

-0

1.4

56.1

37.3

Major PPT

80.8

0.69

82.2

33.3

Minor 5ss

39.8

-1.1

3.2

49.7

46.5

Minor BPS

65.9

0.36

1.4

67.73

40.3

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705