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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25870940_25874236_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

25870940 - 25874236

Intron Length:

3297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTATGCTTC

5'SS Class:

weak_minor

3'SS Sequence:

CTTTTTTTGTGAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TAGTCAT

U12 Branch Point Sequence:

TGGACCTTGATA

Flanking Amino Acid:

HSQNSSGPMVNLTFVMSLLG

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.1

61.3

38.4

Major BPS

0.67

1.1

77.7

37.1

Major PPT

64.3

0.32

1.8

80.3

37.3

Minor 5ss

72.2

0.75

77.6

31.8

Minor BPS

64.9

0.46

1.3

67.77

38.7

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009303

25732812 - 25882516

149705

ENSAPLT00000029317

25732812 - 25882516

149705