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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25874347_25876137_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25874347 - 25876137

Intron Length:

1791

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GCAATAACACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCAGCAATA

Flanking Amino Acid:

KGNTVQPSNRRDNGVVGEIN

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

0.65

1.5

85.7

34.9

Major PPT

49.2

-0

38.6

38.7

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

48.6

-0.1

2.4

72.85

39.3

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705