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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25876344_25882363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25876344 - 25882363

Intron Length:

6020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

ATCCTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TCTTTATTAATC

Flanking Amino Acid:

LLTLPLAMHLAFPANAVTAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

78.2

0.63

0.8

73.6

30.6

Minor 5ss

32.3

-2

3.3

39.1

40.7

Minor BPS

67.5

0.53

1.5

74.76

36.2

Associated Gene:

Gene:

PCNX2

Ensembl Gene ID:

ENSAPLG00000008853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029317

25732812 - 25882516

149705

ENSAPLT00000009303

25732812 - 25882516

149705