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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25908602_25909354_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25908602 - 25909354

Intron Length:
753

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATCTATG

5'SS Class:
major

3'SS Sequence:
TAATAAATTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TTCTAATAAATT

Flanking Amino Acid:
CPEPFAKLMKECWEQDPHIR

Intron Amino Acid Position:
395

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1.2
74.4
41.9

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
63.4
0.3
1
53.2
45.3

Minor 5ss
53.5
0.12
2.1
68.3
42.6

Minor BPS
49.4
0.03
2.1
73.83
43.2

Associated Gene:

Gene:
MAP3K21

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25884900 - 25926610
41711

25884900 - 25926610
41711