Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_25909531_25914552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25909531 - 25914552

Intron Length:

5022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TGTTACTTAGTT

Flanking Amino Acid:

IFNELRTKEKELRSREEELT

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.5

27.6

Major BPS

82.6

0.81

0.8

71.7

Major PPT

84.2

0.77

0.8

81.6

34.4

Minor 5ss

42.2

-0.9

2.7

50.9

39.6

Minor BPS

64.2

0.52

1.8

82.08

39.2

Associated Gene:

Gene:

MAP3K21

Ensembl Gene ID:

ENSAPLG00000009818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020301

25884900 - 25926610

41711

ENSAPLT00000010250

25884900 - 25926610

41711