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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25965280_25965775_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25965280 - 25965775

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTACGTGCA

5'SS Class:

major

3'SS Sequence:

TACGCCCCATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

TTTTTCTTGATG

Flanking Amino Acid:

FICEMPNCGAVFSSRQALNG

Intron Amino Acid Position:

992

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.6

0.35

1.2

59.5

39.6

Major BPS

83.8

0.84

73.6

41.8

Major PPT

59.1

0.21

0.9

56.6

34.5

Minor 5ss

34.8

-1.7

3.4

50.7

45.7

Minor BPS

0.67

1.2

77.73

33.3

Associated Gene:

Gene:

TRERF1

Ensembl Gene ID:

ENSAPLG00000014876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033396

25963867 - 26033503

69637

ENSAPLT00000015521

25963867 - 26033503

69637