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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25965965_25966723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25965965 - 25966723

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGGA

5'SS Class:

major

3'SS Sequence:

CACTCTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TATTTCTTAAAC

Flanking Amino Acid:

RLEKKREECMTSGEEEVLEE

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.5

37.9

Major BPS

82.2

0.8

71.9

35.8

Major PPT

76.9

0.61

0.9

73.5

35.3

Minor 5ss

31.5

-2.1

3.2

37.6

42.2

Minor BPS

76.6

0.81

1.3

80.78

32.9

Associated Gene:

Gene:

TRERF1

Ensembl Gene ID:

ENSAPLG00000014876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033396

25963867 - 26033503

69637

ENSAPLT00000015521

25963867 - 26033503

69637