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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25966838_25967626_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25966838 - 25967626

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTAACTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

AATTCCTTAACT

Flanking Amino Acid:

SKDFIFVQKMVKSKTVAQCV

Intron Amino Acid Position:

891

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

72.2

39.9

Major BPS

69.7

0.49

59.9

38.5

Major PPT

76.6

0.6

0.9

69.9

34.3

Minor 5ss

40.5

-1.1

3.3

52.3

45.8

Minor BPS

90.4

1.35

0.8

96.2

28.5

Associated Gene:

Gene:

TRERF1

Ensembl Gene ID:

ENSAPLG00000014876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033396

25963867 - 26033503

69637

ENSAPLT00000015521

25963867 - 26033503

69637