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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25967716_25972959_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25967716 - 25972959

Intron Length:

5244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTTTC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

CHPLANYHYAGSDKWTHQER

Intron Amino Acid Position:

861

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

73.5

38.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

43.8

-0.7

3.1

61.4

43.6

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

TRERF1

Ensembl Gene ID:

ENSAPLG00000014876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033396

25963867 - 26033503

69637

ENSAPLT00000015521

25963867 - 26033503

69637