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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25974320_25975042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25974320 - 25975042

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATGATGA

5'SS Class:

major

3'SS Sequence:

TTGTTTCTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TTGTTTCTAACA

Flanking Amino Acid:

ELENKVFQQRVEDLLNMSCS

Intron Amino Acid Position:

801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

61.3

40.1

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

81.1

0.7

0.9

77.7

35.5

Minor 5ss

-0.8

2.8

47.3

48.1

Minor BPS

63.9

0.43

1.6

75.22

36.5

Associated Gene:

Gene:

TRERF1

Ensembl Gene ID:

ENSAPLG00000014876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015521

25963867 - 26033503

69637

ENSAPLT00000033396

25963867 - 26033503

69637