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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25981854_25982787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25981854 - 25982787

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAGTT

5'SS Class:

major

3'SS Sequence:

ATTGTCTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

AAGCCTCTAATT

Flanking Amino Acid:

GVRASPNFKQDEGEKPPQQP

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.2

69.9

41.1

Major BPS

82.2

0.8

0.9

81.6

Major PPT

75.3

0.57

69.1

41.3

Minor 5ss

40.5

-1.1

3.8

64.3

47.2

Minor BPS

51.1

0.11

1.6

65.81

38.8

Associated Gene:

Gene:

TRERF1

Ensembl Gene ID:

ENSAPLG00000014876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015521

25963867 - 26033503

69637