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Intron Name: Anas_platyrhynchos_platyrhynchos_3_25983732_25984344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25983732 - 25984344

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTTGATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCC

U12 Branch Point Sequence:

CCTCCTTTGATA

Flanking Amino Acid:

QDSPSAGWPQQVQLSDGRLQ

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

70.6

0.46

0.9

67.6

32.4

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

60.2

0.31

1.2

62.88

38.1

Associated Gene:

Gene:

TRERF1

Ensembl Gene ID:

ENSAPLG00000014876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033396

25963867 - 26033503

69637

ENSAPLT00000015521

25963867 - 26033503

69637