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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26088848_26089806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26088848 - 26089806

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTTTTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTACTTTGAATT

Flanking Amino Acid:

KENELPGLEMIEKNDTYYCM

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

73.9

0.59

30.2

Major PPT

0.54

74.8

33.8

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

59.7

0.38

1.4

74.73

Associated Gene:

Gene:

UBR2

Ensembl Gene ID:

ENSAPLG00000013268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028368

26078444 - 26127211

48768

ENSAPLT00000013967

26078444 - 26127089

48646