Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_26093582_26095485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26093582 - 26095485

Intron Length:

1904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAAA

5'SS Class:

major

3'SS Sequence:

TCTCTTCATTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CTATTACTAACT

Flanking Amino Acid:

TWLGSVIGYSDGLRRILCQV

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

70.2

37.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

71.2

0.48

31.9

Minor 5ss

31.9

-2.1

3.1

38.5

46.8

Minor BPS

52.5

0.16

74.51

41.9

Associated Gene:

Gene:

UBR2

Ensembl Gene ID:

ENSAPLG00000013268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028368

26078444 - 26127211

48768

ENSAPLT00000013967

26078444 - 26127089

48646