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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26109300_26109679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26109300 - 26109679

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GAAACATGAATT

Flanking Amino Acid:

KLKRQNREDTALPPPALPPF

Intron Amino Acid Position:

871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.3

0.79

0.7

82.1

29.1

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

48.1

-0

1.7

62.66

40.4

Associated Gene:

Gene:

UBR2

Ensembl Gene ID:

ENSAPLG00000013268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028368

26078444 - 26127211

48768

ENSAPLT00000013967

26078444 - 26127089

48646