Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_26109835_26110601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26109835 - 26110601

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTCTC

5'SS Class:

major

3'SS Sequence:

AACTTTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

AAATTGCTAACT

Flanking Amino Acid:

YAWSESMLQRVLHLIGMALQ

Intron Amino Acid Position:

923

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

68.8

42.3

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

74.6

0.55

0.8

66.6

39.7

Minor 5ss

44.4

-0.6

2.8

53.5

43.8

Minor BPS

47.5

-0.1

2.3

69.05

41.3

Associated Gene:

Gene:

UBR2

Ensembl Gene ID:

ENSAPLG00000013268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028368

26078444 - 26127211

48768

ENSAPLT00000013967

26078444 - 26127089

48646