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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2611701_2619485_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2611701 - 2619485

Intron Length:

7785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGCCA

5'SS Class:

major

3'SS Sequence:

TGCTTGGCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCAGAT

U12 Branch Point Sequence:

GCTGTCTCAGAT

Flanking Amino Acid:

QAQKYKLQTEGGSGKETSVQ

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

56.2

42.6

Major BPS

61.8

0.29

1.1

58.3

39.2

Major PPT

0.14

1.1

55.1

39.4

Minor 5ss

-2.3

3.4

40.2

45.3

Minor BPS

43.6

-0.4

1.9

57.71

44.9

Associated Gene:

Gene:

BFSP1

Ensembl Gene ID:

ENSAPLG00000015558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016238

2601734 - 2620592

18859