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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26119040_26120918_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26119040 - 26120918

Intron Length:

1879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTAACATATTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCACTTTAACA

Flanking Amino Acid:

VQGHFCTLLASLVPNEKNGN

Intron Amino Acid Position:

1391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

79.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.5

0.37

63.9

41.8

Minor 5ss

42.9

-0.8

2.7

55.2

42.1

Minor BPS

76.5

0.83

1.2

79.82

36.4

Associated Gene:

Gene:

UBR2

Ensembl Gene ID:

ENSAPLG00000013268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028368

26078444 - 26127211

48768

ENSAPLT00000013967

26078444 - 26127089

48646