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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26137613_26143061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26137613 - 26143061

Intron Length:

5449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCTGT

5'SS Class:

major

3'SS Sequence:

TTGCATGGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTTTCTGACAG

Flanking Amino Acid:

VVVLLVWLFETSVMVGLRLL

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

69.7

43.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

67.3

0.39

1.1

61.4

44.2

Minor 5ss

0.14

2.6

74.1

42.2

Minor BPS

51.4

-0

1.9

65.14

42.5

Associated Gene:

Gene:

PRPH2

Ensembl Gene ID:

ENSAPLG00000013186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013730

26137376 - 26146612

9237