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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26199228_26199646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26199228 - 26199646

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

ACTTAATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TGCTACTTAATT

Flanking Amino Acid:

REKRLALVDPDGYQADFCCS

Intron Amino Acid Position:

800

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

78.3

0.64

0.9

74.2

39.6

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

71.3

0.75

1.5

81.75

39.8

Associated Gene:

Gene:

BICRAL

Ensembl Gene ID:

ENSAPLG00000013075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025070

26183948 - 26203639

19692

ENSAPLT00000013633

26183948 - 26200449

16502

ENSAPLT00000036829

26183948 - 26201145

17198

ENSAPLT00000033355

26183948 - 26200449

16502