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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2631420_2633952_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2631420 - 2633952

Intron Length:

2533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTATGCTGT

5'SS Class:

weak_major

3'SS Sequence:

TACTCTTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TACTCTTCCACA

Flanking Amino Acid:

AGVFALALEANLDLTWRDMQ

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

65.1

41.6

Major BPS

67.6

0.44

1.2

Major PPT

77.8

0.62

0.8

72.3

32.1

Minor 5ss

61.8

0.4

2.3

72.9

38.2

Minor BPS

49.8

-0

64.37

42.3

Associated Gene:

Gene:

PCSK2

Ensembl Gene ID:

ENSAPLG00000014969

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015649

2626560 - 2727776

101217