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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_26325252_26326153_F

Intron Information:

Intron Rank:
148748
Intron Class:
major
Intron Phase:
Intron Coordinates:
26325252 - 26326153
Intron Length:
902

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAT|GTGAGTATT
5'SS Class:
strong_major
3'SS Sequence:
TGTTCCACTGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATGTAAA
U12 Branch Point Sequence:
TCTTGTTCCACT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.7
0.79
0.9
89
24.3
Major BPS
66.4
0.41
1.1
67.7
36.5
Major PPT
73.6
0.53
0.8
67.7
33.6
Minor 5ss
38.7
-1.3
3
56
41.5
Minor BPS
46.7
-0.1
2.3
71.32
46.1

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000030071
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000036130
26307523 - 26328823
21301