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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26429231_26447205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26429231 - 26447205

Intron Length:

17975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TGATTTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATGAT

U12 Branch Point Sequence:

TTACACTTATAC

Flanking Amino Acid:

MLSRLLLYGYCYQDSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

72.1

0.55

1.1

44.2

Major PPT

86.5

0.82

0.8

84.8

35.6

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

49.1

-0

1.9

63.68

40.8

Associated Gene:

Gene:

PKDCC

Ensembl Gene ID:

ENSAPLG00000012985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013528

26429213 - 26466489

37277