Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_26453807_26454743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26453807 - 26454743

Intron Length:

937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCACA

5'SS Class:

major

3'SS Sequence:

TGTGTTTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTCATCTGAATC

Flanking Amino Acid:

PLLDKIVNATGELHWGIDET

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

71.6

40.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

71.2

0.48

1.1

71.2

38.9

Minor 5ss

45.2

-0.5

2.6

58.9

45.3

Minor BPS

52.7

0.06

1.5

59.07

40.5

Associated Gene:

Gene:

PKDCC

Ensembl Gene ID:

ENSAPLG00000012985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013528

26429213 - 26466489

37277