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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26821200_26823336_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26821200 - 26823336

Intron Length:

2137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTTCACA

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCATTCTAAAAT

Flanking Amino Acid:

QESKSSAPAKSIKRSLTAEK

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.6

0.23

1.2

58.2

40.3

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

91.4

0.93

0.6

85.5

29.2

Minor 5ss

42.2

-0.9

2.4

51.1

44.9

Minor BPS

57.4

0.31

1.8

73.39

43.4

Associated Gene:

Gene:

EML4

Ensembl Gene ID:

ENSAPLG00000012939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034155

26718994 - 26874500

155507

ENSAPLT00000024327

26718994 - 26874500

155507

ENSAPLT00000048294

26758534 - 26874486

115953

ENSAPLT00000042427

26758534 - 26874500

115967

ENSAPLT00000042062

26672206 - 26874043

201838