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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26827687_26839727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26827687 - 26839727

Intron Length:

12041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTTGTTTCAACA

Flanking Amino Acid:

KMSTREKNSQEGEYIKMFMR

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

75.8

0.64

65.8

Major PPT

81.2

0.7

0.9

77.7

35.5

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

62.3

0.38

1.6

74.67

37.4

Associated Gene:

Gene:

EML4

Ensembl Gene ID:

ENSAPLG00000012939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042062

26672206 - 26874043

201838

ENSAPLT00000034155

26718994 - 26874500

155507

ENSAPLT00000013494

26786156 - 26874043

87888

ENSAPLT00000048294

26758534 - 26874486

115953

ENSAPLT00000013486

26718994 - 26874500

155507

ENSAPLT00000042427

26758534 - 26874500

115967