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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26844813_26846413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26844813 - 26846413

Intron Length:

1601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTAGTATA

5'SS Class:

major

3'SS Sequence:

CTGTCTGTCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTCAT

U12 Branch Point Sequence:

ATGACAGCAAAA

Flanking Amino Acid:

HYLGHTDCVKCLAVHPDKIR

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

80.9

32.7

Major BPS

59.3

0.23

1.4

63.4

44.3

Major PPT

70.6

0.46

0.9

Minor 5ss

35.8

-1.6

2.6

41.2

Minor BPS

38.2

-0.9

2.2

49.68

40.6

Associated Gene:

Gene:

EML4

Ensembl Gene ID:

ENSAPLG00000012939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034155

26718994 - 26874500

155507

ENSAPLT00000024327

26718994 - 26874500

155507

ENSAPLT00000048294

26758534 - 26874486

115953

ENSAPLT00000013494

26786156 - 26874043

87888

ENSAPLT00000042427

26758534 - 26874500

115967

ENSAPLT00000013486

26718994 - 26874500

155507

ENSAPLT00000042062

26672206 - 26874043

201838