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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26846484_26847777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26846484 - 26847777

Intron Length:

1294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

TGCTTTTGCACA

Flanking Amino Acid:

QLAGVDKDGRPLQPHVRVWD

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

75.6

0.58

0.9

71.4

38.4

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

47.5

-0.2

1.9

59.91

40.4

Associated Gene:

Gene:

EML4

Ensembl Gene ID:

ENSAPLG00000012939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013494

26786156 - 26874043

87888

ENSAPLT00000042427

26758534 - 26874500

115967

ENSAPLT00000013486

26718994 - 26874500

155507

ENSAPLT00000042062

26672206 - 26874043

201838

ENSAPLT00000034155

26718994 - 26874500

155507

ENSAPLT00000024327

26718994 - 26874500

155507

ENSAPLT00000048294

26758534 - 26874486

115953