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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26862081_26863332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26862081 - 26863332

Intron Length:

1252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGCAGA

5'SS Class:

major

3'SS Sequence:

TCTTCTATTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTCTATCAAAT

Flanking Amino Acid:

EQLSVMRYSVDGTLLAVGSH

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.9

43.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

82.2

0.72

0.7

77.9

29.2

Minor 5ss

37.4

-1.4

3.1

48.6

47.2

Minor BPS

50.5

0.1

1.9

76.46

39.3

Associated Gene:

Gene:

EML4

Ensembl Gene ID:

ENSAPLG00000012939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034155

26718994 - 26874500

155507

ENSAPLT00000024327

26718994 - 26874500

155507

ENSAPLT00000048294

26758534 - 26874486

115953

ENSAPLT00000013494

26786156 - 26874043

87888

ENSAPLT00000042427

26758534 - 26874500

115967

ENSAPLT00000013486

26718994 - 26874500

155507

ENSAPLT00000042062

26672206 - 26874043

201838