Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_26873708_26873858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26873708 - 26873858

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCTA

5'SS Class:

strong_major

3'SS Sequence:

GGCAGCTCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TGAACCAAAACG

Flanking Amino Acid:

SIIQWKLVEKLPWRATWSSP

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

38.6

Major BPS

58.9

0.22

49.8

35.1

Major PPT

62.5

0.28

50.4

43.8

Minor 5ss

43.3

-0.7

2.9

58.9

45.5

Minor BPS

46.9

-0.3

55.24

Associated Gene:

Gene:

EML4

Ensembl Gene ID:

ENSAPLG00000012939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048294

26758534 - 26874486

115953