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Intron Name: Anas_platyrhynchos_platyrhynchos_3_26939602_26949030_F

Intron Information:

Intron Rank:

135588

Intron Class:

major

Intron Phase:

Intron Coordinates:

26939602 - 26949030

Intron Length:

9429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

GGTTCACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GATGGGTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

75.5

0.57

0.9

70.6

40.2

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

40.4

-0.6

2.7

61.27

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017335

26939342 - 27006051

66710