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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27013476_27050297_F

Intron Information:

Intron Rank:

138383

Intron Class:

major

Intron Phase:

Intron Coordinates:

27013476 - 27050297

Intron Length:

36822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

ACTGCTAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

77.9

0.69

0.8

75.9

Major PPT

82.8

0.74

0.9

80.2

37.3

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

47.2

-0.1

66.51

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042451

27012557 - 27051335

38779