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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27139775_27140961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27139775 - 27140961

Intron Length:

1187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATTCATTATGC

Flanking Amino Acid:

ESVLSYLEKEDTFFYSLVYD

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

32.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.8

0.87

0.6

88.4

21.1

Minor 5ss

40.6

-1

3.1

57.9

46.2

Minor BPS

48.4

-0.1

2.1

63.38

41.7

Associated Gene:

Gene:

MTA3

Ensembl Gene ID:

ENSAPLG00000012098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022374

27095242 - 27223973

128732

ENSAPLT00000042865

27106135 - 27243221

137087

ENSAPLT00000012655

27095242 - 27241174

145933

ENSAPLT00000039354

27106135 - 27243221

137087

ENSAPLT00000031311

27106701 - 27244774

138074

ENSAPLT00000022476

27106135 - 27243221

137087

ENSAPLT00000045807

27106135 - 27244774

138640