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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27157809_27169076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27157809 - 27169076

Intron Length:

11268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TGTTCATGCATT

Flanking Amino Acid:

RQIDQFLVVARAVGTFARAL

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

78.2

32.4

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

80.7

0.69

0.8

76.7

31.9

Minor 5ss

-0.9

3.1

57.2

46.9

Minor BPS

48.8

-0

2.2

75.06

41.5

Associated Gene:

Gene:

MTA3

Ensembl Gene ID:

ENSAPLG00000012098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022476

27106135 - 27243221

137087

ENSAPLT00000045807

27106135 - 27244774

138640

ENSAPLT00000022374

27095242 - 27223973

128732

ENSAPLT00000042865

27106135 - 27243221

137087

ENSAPLT00000012655

27095242 - 27241174

145933

ENSAPLT00000039354

27106135 - 27243221

137087

ENSAPLT00000031311

27106701 - 27244774

138074