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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27189998_27190486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27189998 - 27190486

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ATGTTATGATTT

Flanking Amino Acid:

DKMSSSQPTEESHVRTHMSR

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.4

35.1

Major BPS

84.6

0.86

41.2

Major PPT

88.3

0.86

0.7

84.9

29.9

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

45.6

-0.2

1.9

63.92

40.7

Associated Gene:

Gene:

MTA3

Ensembl Gene ID:

ENSAPLG00000012098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012655

27095242 - 27241174

145933

ENSAPLT00000039354

27106135 - 27243221

137087

ENSAPLT00000031311

27106701 - 27244774

138074

ENSAPLT00000022476

27106135 - 27243221

137087

ENSAPLT00000045807

27106135 - 27244774

138640

ENSAPLT00000022374

27095242 - 27223973

128732

ENSAPLT00000042865

27106135 - 27243221

137087