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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27199280_27203329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27199280 - 27203329

Intron Length:

4050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTCTTAAAC

Flanking Amino Acid:

KPLSCIIGYLEIHPAVKPNV

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.3

32.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.3

0.53

70.3

39.3

Minor 5ss

33.5

-1.9

3.1

44.4

43.7

Minor BPS

71.1

0.64

1.5

79.08

36.2

Associated Gene:

Gene:

MTA3

Ensembl Gene ID:

ENSAPLG00000012098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022476

27106135 - 27243221

137087

ENSAPLT00000045807

27106135 - 27244774

138640

ENSAPLT00000022374

27095242 - 27223973

128732

ENSAPLT00000042865

27106135 - 27243221

137087

ENSAPLT00000012655

27095242 - 27241174

145933

ENSAPLT00000039354

27106135 - 27243221

137087

ENSAPLT00000031311

27106701 - 27244774

138074