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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27215613_27243509_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27215613 - 27243509

Intron Length:

27897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTCTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

GTGTTGTGAAGT

Flanking Amino Acid:

SSSHTTRTIMEREIPNATPC

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

83.2

28.5

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

64.2

0.32

1.7

31.7

Minor 5ss

36.4

-1.5

3.3

45.9

43.7

Minor BPS

44.7

-0.3

2.3

64.76

45.7

Associated Gene:

Gene:

MTA3

Ensembl Gene ID:

ENSAPLG00000012098

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045807

27106135 - 27244774

138640

ENSAPLT00000031311

27106701 - 27244774

138074