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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27304569_27305982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27304569 - 27305982

Intron Length:

1414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

GCTATTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TATTCAATCATC

Flanking Amino Acid:

GDSLLVRAQSLYFWKREEEC

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

68.8

37.4

Major BPS

0.82

0.8

83.9

25.3

Major PPT

81.4

0.71

0.9

72.7

42.2

Minor 5ss

32.2

-2

2.7

39.2

40.4

Minor BPS

46.9

-0.2

2.2

65.9

39.5

Associated Gene:

Gene:

HAAO

Ensembl Gene ID:

ENSAPLG00000011743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041480

27304490 - 27338686

34197

ENSAPLT00000012260

27304490 - 27338686

34197