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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27323680_27333295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27323680 - 27333295

Intron Length:

9616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCTAT

5'SS Class:

major

3'SS Sequence:

TTTGTCTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTGTCTGAACA

Flanking Amino Acid:

KDYHIEEGEEMFLLPARIPH

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

74.9

38.1

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

73.3

0.52

69.8

40.4

Minor 5ss

53.8

0.13

2.6

73.2

43.7

Minor BPS

69.2

0.6

1.5

79.77

36.3

Associated Gene:

Gene:

HAAO

Ensembl Gene ID:

ENSAPLG00000011743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041480

27304490 - 27338686

34197