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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27325399_27333295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27325399 - 27333295

Intron Length:

7897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCTAT

5'SS Class:

major

3'SS Sequence:

CCCATTCCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CTATTGTTATTT

Flanking Amino Acid:

KDYHIEEGEELFYQVKGDMC

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.2

74.9

38.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

76.2

0.59

0.8

72.7

Minor 5ss

53.8

0.13

2.6

73.2

43.7

Minor BPS

47.4

-0.1

2.2

67.57

Associated Gene:

Gene:

HAAO

Ensembl Gene ID:

ENSAPLG00000011743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026209

27304434 - 27338686

34253

ENSAPLT00000012260

27304490 - 27338686

34197