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Intron Name: Anas_platyrhynchos_platyrhynchos_3_27697028_27699244_F

Intron Information:

Intron Rank:

141591

Intron Class:

major

Intron Phase:

Intron Coordinates:

27697028 - 27699244

Intron Length:

2217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGCTT

5'SS Class:

major

3'SS Sequence:

ATTCGATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AAAGCATTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

42.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

78.4

0.64

0.9

74.2

39.9

Minor 5ss

42.8

-0.8

3.4

46.3

Minor BPS

49.4

0.04

1.7

64.04

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026261

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038966

27678805 - 27706022

27218