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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28249131_28251685_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28249131 - 28251685

Intron Length:

2555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TAAATACATATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TTCTCCATAAAT

Flanking Amino Acid:

FLLINEKLILGLSDTLAMWK

Intron Amino Acid Position:

1716

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

66.1

0.4

31.5

Major PPT

59.6

0.22

52.3

41.6

Minor 5ss

32.1

-2

2.8

39.3

41.2

Minor BPS

68.9

0.67

1.7

86.5

38.9

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244