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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28256348_28256660_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28256348 - 28256660

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTGTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTTTTGTGAATT

Flanking Amino Acid:

KEKNLDCFYKVLEILCMMDL

Intron Amino Acid Position:

1603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

71.9

0.49

1.1

65.7

44.8

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

59.2

0.37

2.1

84.15

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244