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Intron Name: Anas_platyrhynchos_platyrhynchos_3_28346276_28347405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28346276 - 28347405

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

CTTACCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTCTCTTACCT

Flanking Amino Acid:

LNESSSVIPQVHALNILRAL

Intron Amino Acid Position:

1201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

75.2

0.57

0.8

68.6

31.7

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

71.9

0.77

1.6

88.99

35.6

Associated Gene:

Gene:

THADA

Ensembl Gene ID:

ENSAPLG00000010472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010987

28221349 - 28380592

159244